Interpretation of R output from Cohen's Kappa Announcing the arrival of Valued Associate #679:...

How many serial ports are on the Pi 3?

Central Vacuuming: Is it worth it, and how does it compare to normal vacuuming?

How does the math work when buying airline miles?

Is there hard evidence that the grant peer review system performs significantly better than random?

How could we fake a moon landing now?

What is the difference between globalisation and imperialism?

Should there be a hyphen in the construction "IT affin"?

How to plot logistic regression decision boundary?

Lagrange four-squares theorem --- deterministic complexity

How were pictures turned from film to a big picture in a picture frame before digital scanning?

"Lost his faith in humanity in the trenches of Verdun" — last line of an SF story

How much damage would a cupful of neutron star matter do to the Earth?

Strange behavior of Object.defineProperty() in JavaScript

Why are vacuum tubes still used in amateur radios?

A term for a woman complaining about things/begging in a cute/childish way

An adverb for when you're not exaggerating

What is the meaning of 'breadth' in breadth first search?

Importance of からだ in this sentence

What would you call this weird metallic apparatus that allows you to lift people?

How many time has Arya actually used Needle?

What do you call the main part of a joke?

Crossing US/Canada Border for less than 24 hours

Time to Settle Down!

How to get all distinct words within a set of lines?



Interpretation of R output from Cohen's Kappa



Announcing the arrival of Valued Associate #679: Cesar Manara
Planned maintenance scheduled April 23, 2019 at 00:00UTC (8:00pm US/Eastern)Strange values of Cohen's kappaCohen's Kappa using (irr) and kappa2() outputs NaNCohen's Kappa, why not simple ratioWhy is Cohen's kappa low despite high observed agreement?Cohen's kappa with three categories of variableExplain Cohen's kappa in a simplest way?Inter-rater reliability - when Cohen's Kappa doesn't workCohen's Kappa: is it valid to average kappa for different rater pairs across multiple trials?Cohen's kappa for repeated measures longitudinal dataInterpreting SPSS Cohen's Kappa output





.everyoneloves__top-leaderboard:empty,.everyoneloves__mid-leaderboard:empty,.everyoneloves__bot-mid-leaderboard:empty{ margin-bottom:0;
}







1












$begingroup$


I have the following result from carrying out Cohen's kappa in R



library(irr)
n = 100
o = c(rep(0,n), rep(1,n))
p = c(rbinom(n,1,0.5), rbinom(n,1,0.51))
k = kappa2(
data.frame(p,o), "unweighted"
)
k


Which outputs



 Cohen's Kappa for 2 Raters (Weights: unweighted)

Subjects = 200
Raters = 2
Kappa = -0.08

z = -1.13
p-value = 0.258


My interpretation of this is that the test is displaying that there seems to be disagreement between the two vectors as kappa is negative. However, given the p value of 0.258 we can't say that this disagreement is significant, and may just be down to chance.



If
someone could highlight if there is anything I'm missing from this interpretation that would be appreciated.










share|cite|improve this question









$endgroup$



















    1












    $begingroup$


    I have the following result from carrying out Cohen's kappa in R



    library(irr)
    n = 100
    o = c(rep(0,n), rep(1,n))
    p = c(rbinom(n,1,0.5), rbinom(n,1,0.51))
    k = kappa2(
    data.frame(p,o), "unweighted"
    )
    k


    Which outputs



     Cohen's Kappa for 2 Raters (Weights: unweighted)

    Subjects = 200
    Raters = 2
    Kappa = -0.08

    z = -1.13
    p-value = 0.258


    My interpretation of this is that the test is displaying that there seems to be disagreement between the two vectors as kappa is negative. However, given the p value of 0.258 we can't say that this disagreement is significant, and may just be down to chance.



    If
    someone could highlight if there is anything I'm missing from this interpretation that would be appreciated.










    share|cite|improve this question









    $endgroup$















      1












      1








      1





      $begingroup$


      I have the following result from carrying out Cohen's kappa in R



      library(irr)
      n = 100
      o = c(rep(0,n), rep(1,n))
      p = c(rbinom(n,1,0.5), rbinom(n,1,0.51))
      k = kappa2(
      data.frame(p,o), "unweighted"
      )
      k


      Which outputs



       Cohen's Kappa for 2 Raters (Weights: unweighted)

      Subjects = 200
      Raters = 2
      Kappa = -0.08

      z = -1.13
      p-value = 0.258


      My interpretation of this is that the test is displaying that there seems to be disagreement between the two vectors as kappa is negative. However, given the p value of 0.258 we can't say that this disagreement is significant, and may just be down to chance.



      If
      someone could highlight if there is anything I'm missing from this interpretation that would be appreciated.










      share|cite|improve this question









      $endgroup$




      I have the following result from carrying out Cohen's kappa in R



      library(irr)
      n = 100
      o = c(rep(0,n), rep(1,n))
      p = c(rbinom(n,1,0.5), rbinom(n,1,0.51))
      k = kappa2(
      data.frame(p,o), "unweighted"
      )
      k


      Which outputs



       Cohen's Kappa for 2 Raters (Weights: unweighted)

      Subjects = 200
      Raters = 2
      Kappa = -0.08

      z = -1.13
      p-value = 0.258


      My interpretation of this is that the test is displaying that there seems to be disagreement between the two vectors as kappa is negative. However, given the p value of 0.258 we can't say that this disagreement is significant, and may just be down to chance.



      If
      someone could highlight if there is anything I'm missing from this interpretation that would be appreciated.







      hypothesis-testing model-comparison agreement-statistics association-measure cohens-kappa






      share|cite|improve this question













      share|cite|improve this question











      share|cite|improve this question




      share|cite|improve this question










      asked 43 mins ago









      baxxbaxx

      293111




      293111






















          1 Answer
          1






          active

          oldest

          votes


















          2












          $begingroup$

          From the perspective of an applied analyst:



          First note: that disagreement means if rater A says 1 rater B says 0; it is like how a Pearson correlation of -1 denotes a strong, albeit negative, relationship. The actual null hypothesis here is: what rater A says has no relation to what rater B says.



          I wouldn't make such vague yet absolute declarations such as "there seems to be disagreement" (or rather there seems to be no agreement). It is not really an appropriate summary of data without significant background and context. If we had that background and context (such as in a discussions section), we could contribute some nuanced synthesis of the result, pointing to improvements or reasons for disagreement, etc.



          To interpret the results: report the percentage agreement, note if any one category was more prevalent (a case when % agreement may be high but $kappa$ may be low). State the kappa statistic and it's confidence interval. I often question the worth of a p-value where the null hypothesis is a stupid case of "no agreement", but you can quote the p-value and say that the data did not provide evidence that the raters agree.






          share|cite|improve this answer









          $endgroup$














            Your Answer








            StackExchange.ready(function() {
            var channelOptions = {
            tags: "".split(" "),
            id: "65"
            };
            initTagRenderer("".split(" "), "".split(" "), channelOptions);

            StackExchange.using("externalEditor", function() {
            // Have to fire editor after snippets, if snippets enabled
            if (StackExchange.settings.snippets.snippetsEnabled) {
            StackExchange.using("snippets", function() {
            createEditor();
            });
            }
            else {
            createEditor();
            }
            });

            function createEditor() {
            StackExchange.prepareEditor({
            heartbeatType: 'answer',
            autoActivateHeartbeat: false,
            convertImagesToLinks: false,
            noModals: true,
            showLowRepImageUploadWarning: true,
            reputationToPostImages: null,
            bindNavPrevention: true,
            postfix: "",
            imageUploader: {
            brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
            contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
            allowUrls: true
            },
            onDemand: true,
            discardSelector: ".discard-answer"
            ,immediatelyShowMarkdownHelp:true
            });


            }
            });














            draft saved

            draft discarded


















            StackExchange.ready(
            function () {
            StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstats.stackexchange.com%2fquestions%2f403970%2finterpretation-of-r-output-from-cohens-kappa%23new-answer', 'question_page');
            }
            );

            Post as a guest















            Required, but never shown

























            1 Answer
            1






            active

            oldest

            votes








            1 Answer
            1






            active

            oldest

            votes









            active

            oldest

            votes






            active

            oldest

            votes









            2












            $begingroup$

            From the perspective of an applied analyst:



            First note: that disagreement means if rater A says 1 rater B says 0; it is like how a Pearson correlation of -1 denotes a strong, albeit negative, relationship. The actual null hypothesis here is: what rater A says has no relation to what rater B says.



            I wouldn't make such vague yet absolute declarations such as "there seems to be disagreement" (or rather there seems to be no agreement). It is not really an appropriate summary of data without significant background and context. If we had that background and context (such as in a discussions section), we could contribute some nuanced synthesis of the result, pointing to improvements or reasons for disagreement, etc.



            To interpret the results: report the percentage agreement, note if any one category was more prevalent (a case when % agreement may be high but $kappa$ may be low). State the kappa statistic and it's confidence interval. I often question the worth of a p-value where the null hypothesis is a stupid case of "no agreement", but you can quote the p-value and say that the data did not provide evidence that the raters agree.






            share|cite|improve this answer









            $endgroup$


















              2












              $begingroup$

              From the perspective of an applied analyst:



              First note: that disagreement means if rater A says 1 rater B says 0; it is like how a Pearson correlation of -1 denotes a strong, albeit negative, relationship. The actual null hypothesis here is: what rater A says has no relation to what rater B says.



              I wouldn't make such vague yet absolute declarations such as "there seems to be disagreement" (or rather there seems to be no agreement). It is not really an appropriate summary of data without significant background and context. If we had that background and context (such as in a discussions section), we could contribute some nuanced synthesis of the result, pointing to improvements or reasons for disagreement, etc.



              To interpret the results: report the percentage agreement, note if any one category was more prevalent (a case when % agreement may be high but $kappa$ may be low). State the kappa statistic and it's confidence interval. I often question the worth of a p-value where the null hypothesis is a stupid case of "no agreement", but you can quote the p-value and say that the data did not provide evidence that the raters agree.






              share|cite|improve this answer









              $endgroup$
















                2












                2








                2





                $begingroup$

                From the perspective of an applied analyst:



                First note: that disagreement means if rater A says 1 rater B says 0; it is like how a Pearson correlation of -1 denotes a strong, albeit negative, relationship. The actual null hypothesis here is: what rater A says has no relation to what rater B says.



                I wouldn't make such vague yet absolute declarations such as "there seems to be disagreement" (or rather there seems to be no agreement). It is not really an appropriate summary of data without significant background and context. If we had that background and context (such as in a discussions section), we could contribute some nuanced synthesis of the result, pointing to improvements or reasons for disagreement, etc.



                To interpret the results: report the percentage agreement, note if any one category was more prevalent (a case when % agreement may be high but $kappa$ may be low). State the kappa statistic and it's confidence interval. I often question the worth of a p-value where the null hypothesis is a stupid case of "no agreement", but you can quote the p-value and say that the data did not provide evidence that the raters agree.






                share|cite|improve this answer









                $endgroup$



                From the perspective of an applied analyst:



                First note: that disagreement means if rater A says 1 rater B says 0; it is like how a Pearson correlation of -1 denotes a strong, albeit negative, relationship. The actual null hypothesis here is: what rater A says has no relation to what rater B says.



                I wouldn't make such vague yet absolute declarations such as "there seems to be disagreement" (or rather there seems to be no agreement). It is not really an appropriate summary of data without significant background and context. If we had that background and context (such as in a discussions section), we could contribute some nuanced synthesis of the result, pointing to improvements or reasons for disagreement, etc.



                To interpret the results: report the percentage agreement, note if any one category was more prevalent (a case when % agreement may be high but $kappa$ may be low). State the kappa statistic and it's confidence interval. I often question the worth of a p-value where the null hypothesis is a stupid case of "no agreement", but you can quote the p-value and say that the data did not provide evidence that the raters agree.







                share|cite|improve this answer












                share|cite|improve this answer



                share|cite|improve this answer










                answered 21 mins ago









                AdamOAdamO

                35.1k264142




                35.1k264142






























                    draft saved

                    draft discarded




















































                    Thanks for contributing an answer to Cross Validated!


                    • Please be sure to answer the question. Provide details and share your research!

                    But avoid



                    • Asking for help, clarification, or responding to other answers.

                    • Making statements based on opinion; back them up with references or personal experience.


                    Use MathJax to format equations. MathJax reference.


                    To learn more, see our tips on writing great answers.




                    draft saved


                    draft discarded














                    StackExchange.ready(
                    function () {
                    StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstats.stackexchange.com%2fquestions%2f403970%2finterpretation-of-r-output-from-cohens-kappa%23new-answer', 'question_page');
                    }
                    );

                    Post as a guest















                    Required, but never shown





















































                    Required, but never shown














                    Required, but never shown












                    Required, but never shown







                    Required, but never shown

































                    Required, but never shown














                    Required, but never shown












                    Required, but never shown







                    Required, but never shown







                    Popular posts from this blog

                    ORA-01691 (unable to extend lob segment) even though my tablespace has AUTOEXTEND onORA-01692: unable to...

                    Always On Availability groups resolving state after failover - Remote harden of transaction...

                    Circunscripción electoral de Guipúzcoa Referencias Menú de navegaciónLas claves del sistema electoral en...